package kappa-library

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type t
type mod_ccs_cache = (int, unit) Hashtbl.t
val empty : Kappa_terms.Model.t -> t
val incorporate_extra_pattern : t -> Kappa_terms.Pattern.id -> Kappa_data_structures.IntCollection.t -> unit
val break_apart_cc : t -> Kappa_site_graphs.Edges.t -> ?mod_connectivity_store:mod_ccs_cache -> (int * int) option -> unit
val merge_cc : t -> ?mod_connectivity_store:mod_ccs_cache -> (int * int) option -> unit
val update_roots : t -> bool -> Kappa_terms.Pattern.Set.t -> Kappa_site_graphs.Edges.t -> mod_ccs_cache -> Kappa_terms.Pattern.id -> int -> unit
val number : t -> Kappa_terms.Pattern.id -> int
val debug_print : Format.formatter -> t -> unit
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