include module type of struct include Biocaml_unix.Phred_score endinclude Ppx_sexp_conv_lib.Sexpable.S with type t := tval t_of_sexp : Sexplib0.Sexp.t -> tval sexp_of_t : t -> Sexplib0.Sexp.tval sexp_of_offset : offset -> Ppx_sexp_conv_lib.Sexp.tval offset_of_sexp : Ppx_sexp_conv_lib.Sexp.t -> offsetval __offset_of_sexp__ : Ppx_sexp_conv_lib.Sexp.t -> offsetval to_int : t -> intConvert a PHRED score to an integer.
val to_probability : t -> floatto_probablity x converts x to a probablity score. Note this is not the inverse of of_probability due to the rounding done by the latter.
val of_solexa_score : ?f:(float -> int) -> Biocaml_unix.Solexa_score.t -> tof_solexa_score x converts Solexa score x to a PHRED score.
The conversion produces a float, and it is unclear what convention is used to convert the resulting float value to an integer. As in of_probability, the optional f parameter is provided to dictate this.
val to_solexa_score : ?f:(float -> int) -> t -> Biocaml_unix.Solexa_score.tto_solexa_score t converts PHRED score t to a Solexa score.
The conversion produces a float, and it is unclear what convention is used to convert the resulting float value to an integer. As in of_probability, the optional f parameter is provided to dictate this.
The min and max PHRED scores when encoded as ASCII characters. Since PHRED scores are virtually always ASCII encoded, you are unlikely to see values outside this range. However, this module allows creating values outside this range, e.g. of_probability 1e-13 exceeds max_as_char, and of_probability 0.9 is smaller than min_as_char (for either offset).
val max_as_char : tval of_int : int -> tval of_probability : ?f:(float -> int) -> float -> t